linkage group 2
Marker	Scaffold Number in Fugu ver5	Map position (cM)		Primer sequences
Marker	Scaffold Number in Fugu ver5	Male Map	Female Map	Forward (5'-3')	Reverse (5'-3')
f1191	266	0.0	0.0	ggttgtgtcggcagtaggat	ggcagctgagttcgctttac
f794	400	0.0	0.0	ggatcagaaaccgcagatgt	tgctagctcacactgcaagg
f965	400	0.0	0.0	ggtggaaagggcatcataaa	ttggtcaactgacgcaactat
f973	500	-	0.0	gcgtgtaatccaggaagtgg	agcgtgaccaggagatcagt
f1352	517	0.0	0.0	cttatcggatcccacagacc	actcccccacctccaatact
f1159	227	0.0	-	ctcccctcagtgtttcggta	atccatcagagcctggtttg
f1158	227	0.0	-	tgaggacctaaggatgtgtgc	gggaaaaacaaacaccagga
f462	34	0.0	3.2	cggaaagccaaactgtaaaaac	aggtcaatgcaggagtaatgtg
f536	34	-	3.2	cgtgatcgcccctgttagta	caggagtgtggagaacagca
f388	34	0.0	9.7	gctccatcaatgcaaagaca	ttgtgttggttttaggcatga
f498	246	0.0	11.3	caaattgggagggagataactgc	acgccctgccggtgaaagac
f1093	246	-	19.4	actgcgagtgtgttgagtgg	tcccaaaacacttgcctacc
f170	393	0.0	19.4	caaacatggcagacaact	ctaaagcaaaggcagattcc
f788	393	0.0	19.4	tgacaacagcacagcctttc	acgctcccttcttggttttt
f951	416	0.0	-	tggggagggacgagtagtaa	ccaaagtgaaatggccctaa
f460	158	1.6	30.9	atacgggtcacccgccacaaaaca	atgagcgagcggaggagccaactt
f355	158	1.6	-	ccgtttggccctctggttcttg	catcgtactgcctcggggttca
f1763	158	1.6	-	cacacacacacaggtccaca	gtttgtgagcacgcaagaga
f1762	158	1.6	-	tgggtgtgttcttctgatcg	agcaggctgtctcattcctc
f501	10	1.6	44.1	gccttccacccgcatctatt	cccccaccatttatttcaacat
f100	10	1.6	47.3	cagggcatagatgggtgtcaaaaa	gtgcggaatgggagaaacctacc
f1564	10	1.6	47.3	gctgacggatacgtttggat	ttcctcagcagcttttcaca
f108	10	-	52.2	cagatgggacagaggaggaa	ccgaaagatggacctgaaaa
f538	10	4.8	52.2	gccgggaaaagcctctacat	cgccgcatcttaacaacttttt
f1733	10	4.8	53.8	catggcatagtgcgaatgtc	tcacgttgcaccttcatcat
f1734	10	-	53.8	gagacaagcagcctttcagc	atgacttccaagggcaacag
f263	10	4.8	-	acttgcctggtgtttctcta	agccttctgtgatgtctgc
f1003	10	4.8	61.9	cctctgccttctgtctttgc	ggatttcaggtgtgggtagg
f882	10	4.8	65.1	gctccatttctctctccatcc	ataacagcagccgaggagaa
f75	10	6.4	66.9	ttcggcatgtcaagcaaaggttag	caggcggcagtgaagacagtagc
f7	10	8.0	66.9	ttaaatgaggcgaaggtcgt	acagaaaagcggcacattg
f984	10	-	78.2	cgtccatggcttagctgatt	ccacacacccattacaagca
f851	10	16.1	83.1	tgcttgatgaggtgatggaa	agcaggaaggactgcaaatg
f537	10	16.1	83.1	catttgcagtccttcctgct	agcgtctgcagaatctggtt
f387	2,061	8.0^b	78.2^b	ggccgaacccgctaatgacaaa	ttacaggcggaaacacgagacg
f1688	2,099	8.0^b	78.2^b	cgcgcatcacactgatataga	cacactctgggaggtgttga
f941	429	24.2	84.7	tgcaattaggggaagcaaac	tcggggtatgtttccttttg
f502	136	29.1	89.6	tgcaggaagagtcggccattatcg	cggggacgcggggactttaga
f1017	136	32.3	97.7	aactgtggagacgcagggta	gtgactctcgtggtgcagaa
f1569	773	33.9	97.7	aacggtgacatcaccacaaa	cgcgacctttgaccttttta
f810	419	35.5	97.7	gggagtcctcactgagatgg	taatggagccacaggtcaca
f1380	548	35.5	97.7	gagatggacagccagaggtt	aagagaggggaggtcagagc
f53	403	38.7	97.7	agacccgctcctccacgcaagac	gttccccggccccacact
f235	237	46.8	97.7	atcttcgtcgtaatcttcgtcgtc	aaatgtttgttctgtctgagc
f242	237	46.8	97.7	ctgctgggctggacctgcttttta	agtgcggtttggctgcgattcc
f1270a	237	-	-	gctgatgtttgtttgcagga	tgtgcacgattgaggttttc
f497	414	48.4	-	ccacccaggcagcttctacatca	cttcctctacatcgccctcacctc
f1421	595	50.0	97.7	caaatctttgctcccagctc	agaggctttgcttcccattt
f1662	338	50.0	97.7	ctgagtccctgcatttgacc	aggtggaggagaggaacgat
f496	338	53.2	97.7	taaacaggcccgaagagaaacgac	cgagcaggcaggaaccacaaa
f499	388	53.2	97.7	ttggcggaagctgttgtgtaaaaa	ccaggcaggagtcatgagggtaga
f386	388	-	97.7	tcgcccgtcgagcaacaaac	tcagggacgccaagaacggactc
f791	396	53.2	97.7	gtcctgactctcagcccaac	attggacgtctccactctgg
f864	478	53.2	97.7	ttctcacgctgtcttcatgg	tcagactgcagaatggcaac
f1457	640	-	97.7	aggacgtctcttgctttgga	tgtctggagcagcagagaaa