linkage group 1 | |||||
---|---|---|---|---|---|
Marker | Scaffold Number in Fugu ver5 | Map position (cM) | Primer sequences | ||
Male Map | Female Map | Forward (5'-3') | Reverse (5'-3') | ||
f1435 | 615 | 0.0 | 0.0 | ccgtgtggtcccagaactat | ttcgatcctccagtttcctg |
f1643 | 952 | 1.6 | 0.0 | gctgtgttagtggtagcgaaa | gtcaccaaccagcccattag |
f1681 | 2090 | 1.6 | 0.0 | aaacaccaccactgtctgtcc | tgtctcttggcctcaggatt |
f1484 | 674 | 3.2 | 0.0 | ctgcaggtatcgttgcttca | gaggtctgtgatggccaagt |
f1528 | 726 | 3.2 | 0.0 | aggtacaaggacgccatcac | cacaaacaggttcctgctga |
f1543 | 741 | 3.2 | 0.0 | tgagccagcttttcgtcttt | aggtgggggtggttgtaagt |
f741 | 339 | 11.3 | 1.6 | acctgtccatgaccgaagag | tgcagtccttgttaggctga |
f1132 | 134 | 12.9 | 1.6 | agtagggctgcttggaatga | caggatggatctttccctca |
f619 | 134 | 22.7 | 6.5 | tgctcccagatgtaaaaatg | cttcaagcccaccagtatg |
f673 | 235 | 30.8 | 6.5 | cgctgtttccatcatcttca | cggtctccatgacaacactg |
f370 | 130 | 35.7 | - | ctctgaggaatacggctttgtt | gatggaattccggagtgtgagtta |
f369 | 130 | 37.3 | 6.5 | tggcgcaaatcacatgttagagac | aagtatccatatgtgcagtgacca |
f709 | 130 | - | 19.7 | accaagccagcaatgaaaag | attcccaaacaaaagcaacg |
f754 | 355 | 42.2 | - | ctcctttggaatttggcatc | ggtagacgacccgaagtctg |
f1670 | 2072 | 42.2 | 19.7 | tttagggaccagcagagcat | ggcaagaagggagaaatcct |
f1409 | 59 | 42.2 | 19.7 | ctgctcagccaatcacaaga | tgtcacacgcagacacacat |
f39 | 59 | 42.2 | 19.7 | aagcaggacacagaacacaca | acatgcacaccaggagatca |
f282 | 59 | 42.2 | 31.2 | gaatgcaaatattggtgctcaa | acaggaaatggcctcaaaaa |
f985 | 59 | 43.8 | 37.7 | ataatctggagtgcgctggt | ctcaatgtggccagttcctt |
f832 | 443 | 43.8 | - | cgaggggtgtgatgaaaact | cgtttcttgtttgatgttgtgc |
f1221 | 443 | 43.8 | 37.7 | ccatgtgatcactttgattagtcc | cttgggaaatgttcgtttga |
f888 | 254 | - | 37.7 | gtgccagggtacatctcgtt | ggcatgtttcacgttgagtg |
f704 | 286 | - | 37.7 | agcaactgttgtcagctcca | agttgctggcaaactggatt |
f590 | 286 | - | 37.7 | gggggccatctcattgttg | agaggactgtgggtactttagcat |
f723 | 316 | - | 37.7 | acccactggcaaagtacagc | tccagggtcaggattagacg |
f1056 | 391 | 43.8 | 37.7 | cgacacaaagagcagcacat | cagtgcaaaggcaaacacac |
f131 | 3 | - | 37.7 | attggcacagcaatgttgaa | agcacccaacaaggtggtag |
f330 | 3 | 43.8 | 37.7 | ccgcgacacctcacccatcac | gtcccactccccttcatctcttca |
f167 | 3 | - | 54.5 | ctaaaatttgcccccttctaacc | gacccttcaaaatcaatgtg |
f331 | 3 | 43.8 | 66.1 | gtcggcaacatgtagcttccaata | tactccgcctcgccttcctt |
f41 | 3 | 43.8 | 69.3 | tcatatgggaggccgtttag | gtgctggggtgtgaattttt |
f198 | 3 | 43.8 | 74.2 | tgcagctcctgtggaatgta | gttgaaagtgcccccaac |
f61 | 81 | 43.8 | 82.3 | tggggatttagcagcactta | ccagcacagaggggagaaa |
f161 | 81 | 43.8 | 82.3 | tgtacgtatttatccattttcagc | ggtgtagcagccccttca |
f84 | 81 | 43.8 | - | cggtagtctgtgcgattctg | atgtttccaggcctgctatg |
f1728 | 81 | 43.8 | 83.9 | ccgtgggatgctgctattat | cacggactccaggaactcat |
f1727 | 81 | 43.8 | 83.9 | cggtcattgcccttaatgtt | gccctggaaccaagactcat |
f943 | 437 | 43.8 | 83.9 | cacaacgcattgctatcacc | ccgccttaaaggagtgtgag |
f1686 | 31 | 43.8 | - | tgttcccatgtgtcatttgc | gggttctttgagcatcatctg |
f1712 | 31 | 43.8 | 83.9 | atctctgaagcccagggaag | caaacctgctcagtccaaca |
f275 | 31 | 47.0 | - | ctgtgcagaggtcaaaccaa | aagcgagatgtgtgcacttg |
f127 | 31 | - | 85.5 | atgagatgggcagcacaaat | accatccgcttgaatagcac |
f1711 | 31 | 47.0 | 87.1 | tgtaattgctccagggttcc | atgtttagagggctgctgga |
f166 | 42 | 50.2 | 88.7 | aaaaattgcaaagaagaaaaac | acaggatggcagtgaagagg |
f147 | 42 | - | 95.2 | cgcagatgagatgaatttgg | catgccaagcaaatccagta |
f50 | 100 | 50.2 | 100.1 | attagtcgttcattgtcctcctg | caacactgaattttaacctcttt |
f28 | 100 | 50.2 | 101.7 | ttccatcctcaggtaaacagact | ggccccacagcttcagaggact |
f270 | 100 | 51.8 | 107.4 | agaggagctgtaaataaaggtt | atgcaagtacaaagccagtctcac |
f109 | 100 | 51.8 | 113.1 | cccctcacacaaaggacaac | tcttctctccctggttcagc |
f146 | 46 | 51.8 | 114.7 | cattggctggtccctgattt | gttcccctatttgcacattattt |
f987 | 46 | 56.7 | - | aaggccaatgctgatgtagg | ccacccccttcatcttttct |
f512 | 182 | 56.7 | 127.9 | ggaaactgagtggcttctcg | gtgttcagccctgaggatgt |
f1029 | 182 | - | 136.0 | gcctttattcaccaggcagt | ggcaggtgacagaacttggt |
f948 | 182 | - | 139.2 | cagcacttggtaggcagtga | ggtgtctctgggaccacact |
f483 | 423 | 56.7 | 139.2 | aatcggcactcacccccagaaatg | cgcccgcgatgttgcctacc |
f814 | 423 | 56.7 | 139.2 | attgtcccaccgtagcaaag | ccccttcatgggctaaaact |
f1181 | 492 | 56.7 | 139.2 | tgactaacagctgcaacagg | gattccagcagcagaagagg |
f1729 | 83 | 58.3 | 139.2 | cagtcgttctccggttcatt | caggaaacaatcagcccact |
f1730 | 83 | 58.3 | 139.2 | gcttgtgggtaaacatgcac | aaagaaacggcaggttgatg |
f443 | 83 | 58.3 | 139.2 | ctcttctttcatcaggccatt | gctcagccaaatttcctcac |
f83 | 83 | 59.1 | - | cttattccggtcccttagcc | ctggaacctgtgtggtgttg |
f1792 | 197 | 59.9 | 149.0 | gcgctggagtttatcccagt | aaagaagttggctcgctctg |
f1337 | 197 | 59.9 | 153.9 | gcaggagtggacgagtgttt | ttgttggtccctgttgttga |
f1156 | 197 | 59.9 | - | gctcagcagcaaaacaacaa | ggatggcatgaataaccaca |
f1791 | 197 | 59.9 | 158.8 | ttggatgctaccaagagagaga | gctggtattgccgtggtatt |
f411 | 184 | 59.9 | 158.8 | gctcctaatgcgatttctcg | cagcaggaagcgtttagctc |
f513 | 184 | 59.9 | 158.8 | ccaggcaacccatgaatagt | caaatgtgccctcgaacttt |
f1495 | 184 | - | 158.8 | tttgctgcacacgagtaacc | tttgggcaggacaagaaaac |
f1021 | 149 | 59.9 | 158.8 | ccatctgcttcctggacatt | cagactgtaacgaggggaaaa |
f430 | 149 | 63.1 | 160.4 | cgtccccgccgtgattgg | tagtgcgggcttgctctggaaaac |
f1176 | 38 | 68.0 | - | tcggccgaagactttagaga | cgtcagtcggtgtcatgttc |
f1177 | 38 | 69.6 | - | gagaagatgtgggatcactgg | ggtttcattagcagcctcca |
f267 | 38 | 71.2 | 165.3 | aagcgaagtgaaccagagatgaag | tccccgttgatgccagtgaa |
f514 | 38 | - | 170.2 | gtgtgtccgaggtcagatcc | ctctgcccactttaacagca |
f149 | 38 | 91.6 | 175.1 | aagccgtcctgtatttccacta | cagcgcttatgatgtattttta |
f1559 | 762 | 98.1b | - | agtcaccgttgtcccatgtc | aggaggaagaggaggtctgaa |
f1472 | 659 | - | 179.9b | cgcacagttccatcaacctt | gaacgcctcatcctatcagc |
f823 | 432 | 91.6 | 178.3 | tagactccaccgcaatgtga | agacaggaagacggagcttg |
f1430 | 609 | 98.1 | 179.9 | caccacacagaaccagcatc | tgttttgtcaggctgaagga |
f273 | 348 | 99.7 | 179.9 | ccaaacttcacccgggacaacaa | cagcggcattcacggcatagat |
f1196 | 353 | 99.7 | 179.9 | ggtcatgatggtgtcacctg | gtaatcgatggcctgaggaa |
f1049 | 353 | - | 179.9 | atgtgaagttcgggtgatcc | tttctgtggtgtgacgcaat |
f1197 | 353 | 99.7 | 179.9 | tcagagttctgggagaaggaa | cctgttgtcgtccgtcatta |
f1407 | 579 | 99.7 | 179.9 | caaagacgttcacccacaga | accgtctctgcctttgacag |
f35 | 612 | 99.7 | - | atgcaaatctgtcctcgtctg | attggctgctcacctgttttg |
f1579 | 788 | 99.7 | 179.9 | cgacaaacccagaaaaacca | gcgtatccatgacagcacag |
f1635 | 913 | 99.7 | 179.9 | aggtactgatggtgggatgg | tcagccttcgaaaaatgacc |