| linkage group 1 | |||||
|---|---|---|---|---|---|
| Marker | Scaffold Number in Fugu ver5 | Map position (cM) | Primer sequences | ||
| Male Map | Female Map | Forward (5'-3') | Reverse (5'-3') | ||
| f1435 | 615 | 0.0 | 0.0 | ccgtgtggtcccagaactat | ttcgatcctccagtttcctg |
| f1643 | 952 | 1.6 | 0.0 | gctgtgttagtggtagcgaaa | gtcaccaaccagcccattag |
| f1681 | 2090 | 1.6 | 0.0 | aaacaccaccactgtctgtcc | tgtctcttggcctcaggatt |
| f1484 | 674 | 3.2 | 0.0 | ctgcaggtatcgttgcttca | gaggtctgtgatggccaagt |
| f1528 | 726 | 3.2 | 0.0 | aggtacaaggacgccatcac | cacaaacaggttcctgctga |
| f1543 | 741 | 3.2 | 0.0 | tgagccagcttttcgtcttt | aggtgggggtggttgtaagt |
| f741 | 339 | 11.3 | 1.6 | acctgtccatgaccgaagag | tgcagtccttgttaggctga |
| f1132 | 134 | 12.9 | 1.6 | agtagggctgcttggaatga | caggatggatctttccctca |
| f619 | 134 | 22.7 | 6.5 | tgctcccagatgtaaaaatg | cttcaagcccaccagtatg |
| f673 | 235 | 30.8 | 6.5 | cgctgtttccatcatcttca | cggtctccatgacaacactg |
| f370 | 130 | 35.7 | - | ctctgaggaatacggctttgtt | gatggaattccggagtgtgagtta |
| f369 | 130 | 37.3 | 6.5 | tggcgcaaatcacatgttagagac | aagtatccatatgtgcagtgacca |
| f709 | 130 | - | 19.7 | accaagccagcaatgaaaag | attcccaaacaaaagcaacg |
| f754 | 355 | 42.2 | - | ctcctttggaatttggcatc | ggtagacgacccgaagtctg |
| f1670 | 2072 | 42.2 | 19.7 | tttagggaccagcagagcat | ggcaagaagggagaaatcct |
| f1409 | 59 | 42.2 | 19.7 | ctgctcagccaatcacaaga | tgtcacacgcagacacacat |
| f39 | 59 | 42.2 | 19.7 | aagcaggacacagaacacaca | acatgcacaccaggagatca |
| f282 | 59 | 42.2 | 31.2 | gaatgcaaatattggtgctcaa | acaggaaatggcctcaaaaa |
| f985 | 59 | 43.8 | 37.7 | ataatctggagtgcgctggt | ctcaatgtggccagttcctt |
| f832 | 443 | 43.8 | - | cgaggggtgtgatgaaaact | cgtttcttgtttgatgttgtgc |
| f1221 | 443 | 43.8 | 37.7 | ccatgtgatcactttgattagtcc | cttgggaaatgttcgtttga |
| f888 | 254 | - | 37.7 | gtgccagggtacatctcgtt | ggcatgtttcacgttgagtg |
| f704 | 286 | - | 37.7 | agcaactgttgtcagctcca | agttgctggcaaactggatt |
| f590 | 286 | - | 37.7 | gggggccatctcattgttg | agaggactgtgggtactttagcat |
| f723 | 316 | - | 37.7 | acccactggcaaagtacagc | tccagggtcaggattagacg |
| f1056 | 391 | 43.8 | 37.7 | cgacacaaagagcagcacat | cagtgcaaaggcaaacacac |
| f131 | 3 | - | 37.7 | attggcacagcaatgttgaa | agcacccaacaaggtggtag |
| f330 | 3 | 43.8 | 37.7 | ccgcgacacctcacccatcac | gtcccactccccttcatctcttca |
| f167 | 3 | - | 54.5 | ctaaaatttgcccccttctaacc | gacccttcaaaatcaatgtg |
| f331 | 3 | 43.8 | 66.1 | gtcggcaacatgtagcttccaata | tactccgcctcgccttcctt |
| f41 | 3 | 43.8 | 69.3 | tcatatgggaggccgtttag | gtgctggggtgtgaattttt |
| f198 | 3 | 43.8 | 74.2 | tgcagctcctgtggaatgta | gttgaaagtgcccccaac |
| f61 | 81 | 43.8 | 82.3 | tggggatttagcagcactta | ccagcacagaggggagaaa |
| f161 | 81 | 43.8 | 82.3 | tgtacgtatttatccattttcagc | ggtgtagcagccccttca |
| f84 | 81 | 43.8 | - | cggtagtctgtgcgattctg | atgtttccaggcctgctatg |
| f1728 | 81 | 43.8 | 83.9 | ccgtgggatgctgctattat | cacggactccaggaactcat |
| f1727 | 81 | 43.8 | 83.9 | cggtcattgcccttaatgtt | gccctggaaccaagactcat |
| f943 | 437 | 43.8 | 83.9 | cacaacgcattgctatcacc | ccgccttaaaggagtgtgag |
| f1686 | 31 | 43.8 | - | tgttcccatgtgtcatttgc | gggttctttgagcatcatctg |
| f1712 | 31 | 43.8 | 83.9 | atctctgaagcccagggaag | caaacctgctcagtccaaca |
| f275 | 31 | 47.0 | - | ctgtgcagaggtcaaaccaa | aagcgagatgtgtgcacttg |
| f127 | 31 | - | 85.5 | atgagatgggcagcacaaat | accatccgcttgaatagcac |
| f1711 | 31 | 47.0 | 87.1 | tgtaattgctccagggttcc | atgtttagagggctgctgga |
| f166 | 42 | 50.2 | 88.7 | aaaaattgcaaagaagaaaaac | acaggatggcagtgaagagg |
| f147 | 42 | - | 95.2 | cgcagatgagatgaatttgg | catgccaagcaaatccagta |
| f50 | 100 | 50.2 | 100.1 | attagtcgttcattgtcctcctg | caacactgaattttaacctcttt |
| f28 | 100 | 50.2 | 101.7 | ttccatcctcaggtaaacagact | ggccccacagcttcagaggact |
| f270 | 100 | 51.8 | 107.4 | agaggagctgtaaataaaggtt | atgcaagtacaaagccagtctcac |
| f109 | 100 | 51.8 | 113.1 | cccctcacacaaaggacaac | tcttctctccctggttcagc |
| f146 | 46 | 51.8 | 114.7 | cattggctggtccctgattt | gttcccctatttgcacattattt |
| f987 | 46 | 56.7 | - | aaggccaatgctgatgtagg | ccacccccttcatcttttct |
| f512 | 182 | 56.7 | 127.9 | ggaaactgagtggcttctcg | gtgttcagccctgaggatgt |
| f1029 | 182 | - | 136.0 | gcctttattcaccaggcagt | ggcaggtgacagaacttggt |
| f948 | 182 | - | 139.2 | cagcacttggtaggcagtga | ggtgtctctgggaccacact |
| f483 | 423 | 56.7 | 139.2 | aatcggcactcacccccagaaatg | cgcccgcgatgttgcctacc |
| f814 | 423 | 56.7 | 139.2 | attgtcccaccgtagcaaag | ccccttcatgggctaaaact |
| f1181 | 492 | 56.7 | 139.2 | tgactaacagctgcaacagg | gattccagcagcagaagagg |
| f1729 | 83 | 58.3 | 139.2 | cagtcgttctccggttcatt | caggaaacaatcagcccact |
| f1730 | 83 | 58.3 | 139.2 | gcttgtgggtaaacatgcac | aaagaaacggcaggttgatg |
| f443 | 83 | 58.3 | 139.2 | ctcttctttcatcaggccatt | gctcagccaaatttcctcac |
| f83 | 83 | 59.1 | - | cttattccggtcccttagcc | ctggaacctgtgtggtgttg |
| f1792 | 197 | 59.9 | 149.0 | gcgctggagtttatcccagt | aaagaagttggctcgctctg |
| f1337 | 197 | 59.9 | 153.9 | gcaggagtggacgagtgttt | ttgttggtccctgttgttga |
| f1156 | 197 | 59.9 | - | gctcagcagcaaaacaacaa | ggatggcatgaataaccaca |
| f1791 | 197 | 59.9 | 158.8 | ttggatgctaccaagagagaga | gctggtattgccgtggtatt |
| f411 | 184 | 59.9 | 158.8 | gctcctaatgcgatttctcg | cagcaggaagcgtttagctc |
| f513 | 184 | 59.9 | 158.8 | ccaggcaacccatgaatagt | caaatgtgccctcgaacttt |
| f1495 | 184 | - | 158.8 | tttgctgcacacgagtaacc | tttgggcaggacaagaaaac |
| f1021 | 149 | 59.9 | 158.8 | ccatctgcttcctggacatt | cagactgtaacgaggggaaaa |
| f430 | 149 | 63.1 | 160.4 | cgtccccgccgtgattgg | tagtgcgggcttgctctggaaaac |
| f1176 | 38 | 68.0 | - | tcggccgaagactttagaga | cgtcagtcggtgtcatgttc |
| f1177 | 38 | 69.6 | - | gagaagatgtgggatcactgg | ggtttcattagcagcctcca |
| f267 | 38 | 71.2 | 165.3 | aagcgaagtgaaccagagatgaag | tccccgttgatgccagtgaa |
| f514 | 38 | - | 170.2 | gtgtgtccgaggtcagatcc | ctctgcccactttaacagca |
| f149 | 38 | 91.6 | 175.1 | aagccgtcctgtatttccacta | cagcgcttatgatgtattttta |
| f1559 | 762 | 98.1b | - | agtcaccgttgtcccatgtc | aggaggaagaggaggtctgaa |
| f1472 | 659 | - | 179.9b | cgcacagttccatcaacctt | gaacgcctcatcctatcagc |
| f823 | 432 | 91.6 | 178.3 | tagactccaccgcaatgtga | agacaggaagacggagcttg |
| f1430 | 609 | 98.1 | 179.9 | caccacacagaaccagcatc | tgttttgtcaggctgaagga |
| f273 | 348 | 99.7 | 179.9 | ccaaacttcacccgggacaacaa | cagcggcattcacggcatagat |
| f1196 | 353 | 99.7 | 179.9 | ggtcatgatggtgtcacctg | gtaatcgatggcctgaggaa |
| f1049 | 353 | - | 179.9 | atgtgaagttcgggtgatcc | tttctgtggtgtgacgcaat |
| f1197 | 353 | 99.7 | 179.9 | tcagagttctgggagaaggaa | cctgttgtcgtccgtcatta |
| f1407 | 579 | 99.7 | 179.9 | caaagacgttcacccacaga | accgtctctgcctttgacag |
| f35 | 612 | 99.7 | - | atgcaaatctgtcctcgtctg | attggctgctcacctgttttg |
| f1579 | 788 | 99.7 | 179.9 | cgacaaacccagaaaaacca | gcgtatccatgacagcacag |
| f1635 | 913 | 99.7 | 179.9 | aggtactgatggtgggatgg | tcagccttcgaaaaatgacc |